miRBase entry: hcmv-mir-UL59

Stem-loop hcmv-mir-UL59

Accession

MI0024164

Description

Human cytomegalovirus hcmv-mir-UL59 precursor miRNA

Sequence

cgacgGUUCUCUCGCUCGUCAUGCCGUucugagcuccgacauggcggacgagagaaaauggcgucg
(((((.((((((((.((((((((.((..........)).)))))))).)))))))....).)))))

Structure

     G ----       C        C  Uucu 
cgacg U    UCUCUCG UCGUCAUG CG    g
||||| |    ||||||| |||||||| ||     
gcugc g    agagagc ggcgguac gc    a
     g uaaa       a        a  cucg

Annotation confidence Not enough data

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Genome context

HEHCMVCG: 94602-94667 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from hcmv-mir-UL59

Name	Accession	Chromosome	Start	End	Strand	Confidence

Disease association

hcmv-mir-UL59 is associated with one or more human diseases in the Human microRNA Disease Database

Disease	Description	Category	PubMed ID

Database links

Mature hcmv-miR-UL59

Accession	MIMAT0029122
Description	Human cytomegalovirus hcmv-miR-UL59 mature miRNA
Sequence	6 - GUUCUCUCGCUCGUCAUGCCGU - 27
Evidence	experimental Illumina [1]

References

PubMed ID: 22715351
The microRNA Transcriptome of Human Cytomegalovirus (HCMV)
"Meshesha MK, Veksler-Lublinsky I, Isakov O, Reichenstein I, Shomron N, Kedem K, Ziv-Ukelson M, Bentwich Z, Avni YS"
"Open Virol J (2012) 6:38-48