Stem-loop hcmv-mir-UL69

Accession

MI0024165

Description

Human cytomegalovirus hcmv-mir-UL69 precursor miRNA

Sequence

aggCCAGAGGCUAAGCCGAAACCGuccggggaagcgggcgcgaguuuuccgacuuagccuuuggugc
..(((((((((((((.((((((((((((......))))))...))))..)).)))))))))))))..

Structure

ag             C  --    ---      gg 
  gCCAGAGGCUAAG CG  AAAC   CGuccg  g
  ||||||||||||| ||  ||||   ||||||   
  ugguuuccgauuc gc  uuug   gcgggc  a
cg             a  cu    agc      ga 

Annotation confidence Not enough data

Genome context

HEHCMVCG: 96898-96964 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from hcmv-mir-UL69

Mature hcmv-miR-UL69

• Accession: MIMAT0029123
• Description: Human cytomegalovirus hcmv-miR-UL69 mature miRNA
• Sequence: 4 - CCAGAGGCUAAGCCGAAACCG - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22715351
   The microRNA Transcriptome of Human Cytomegalovirus (HCMV)
   "Meshesha MK, Veksler-Lublinsky I, Isakov O, Reichenstein I, Shomron N, Kedem K, Ziv-Ukelson M, Bentwich Z, Avni YS"
   "Open Virol J (2012) 6:38-48