Stem-loop ghr-MIR7486a

Accession

MI0024169

Description

Gossypium hirsutum ghr-MIR7486a precursor miRNA

Sequence

1861 reads, 95.0 reads per million, 49 experiments

acgcuucuucAAGGAAGCGCUUUGUCCACGUGGAcagaauacgcguccuugagggcgcgcuuuguguccacaUGGACAAAGCGCUUCCUUGAGgaagcguuuucc
((((((((((((((((((((((((((((.(((((((.((..(((((((....)))))))..)).))))))).)))))))))))))))))))))))))))).....

Structure

-----                            C       g  ua       u 
     acgcuucuucAAGGAAGCGCUUUGUCCA GUGGAca aa  cgcgucc u
     |||||||||||||||||||||||||||| ||||||| ||  |||||||  
     ugcgaagGAGUUCCUUCGCGAAACAGGU caccugu uu  gcgcggg g
ccuuu                            a       g  uc       a 

Annotation confidence Medium

Genome context

Unknown

Mature ghr-miR7486a-5p

• Accession: MIMAT0029127
• Description: Gossypium hirsutum ghr-miR7486a-5p mature miRNA
• Sequence: 11 - AAGGAAGCGCUUUGUCCACGUGGA - 34
• Evidence: experimental ; Illumina [1]

Mature ghr-miR7486a-3p

• Accession: MIMAT0055314
• Description: Gossypium hirsutum ghr-miR7486a-3p mature miRNA
• Sequence: 73 - UGGACAAAGCGCUUCCUUGAG - 93
• Evidence: experimental ; unknown

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900