miRBase entry: ghr-MIR7486b

Stem-loop ghr-MIR7486b


Accession
MI0024170
Description
Gossypium hirsutum ghr-MIR7486b precursor miRNA


Sequence

1689 reads, 99.0 reads per million, 49 experiments
gcacuuacucAAGGAAGCGCUUUGUCCACGUGGAcagaaauuguauccuugagggcgcacuuucuguccaCGUGGACAAAGCGCUCCCuugagaaagcguu
((.(((.(((((((.(((((((((((((((((((((((((.(((.(((....))).))).))))))))))))))))))))))))).))))))).))).)).

Structure
-  a   a       A                         u   a   u 
 gc cuu cucAAGG AGCGCUUUGUCCACGUGGAcagaaa ugu ucc u
 || ||| ||||||| ||||||||||||||||||||||||| ||| |||  
 ug gaa gaguuCC UCGCGAAACAGGUGCaccugucuuu acg ggg g
u  c   a       C                         c   c   a 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ghr-miR7486b-5p

Accession MIMAT0029128
Description Gossypium hirsutum ghr-miR7486b-5p mature miRNA
Sequence 11 - AAGGAAGCGCUUUGUCCACGUGGA - 34
Evidence experimental
Illumina [1]

Mature ghr-miR7486b-3p

Accession MIMAT0055315
Description Gossypium hirsutum ghr-miR7486b-3p mature miRNA
Sequence 71 - CGUGGACAAAGCGCUCCC - 88
Evidence experimental
unknown

References

  1. PubMed ID: 22138860
    A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
    "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
    "Mol Plant (2012) 5:889-900