Stem-loop ghr-MIR7492a

Accession

MI0024176

Description

Gossypium hirsutum ghr-MIR7492a precursor miRNA

Literature search

1 open access papers mention ghr-MIR7492a
(1 sentences)

Sequence

3629 reads, 199.0 reads per million, 49 experiments

acaaacgccgCUAUAGAACAUGAUCUUUAGCGGgcguucuccacaaacuucgcuaaagaacaugacuuuagcagcguuuuuuuaugagaagugucgcuAAAGGUCAUGUUCUAUAGCGGCGUcccacauaa
....(((((((((((((((((((((((((((((...(((((...((((...(((((((.......)))))))...))))......)))))...))))))))))))))))))))))))))))).........

Structure

-----acaa                             gcg     ---cac    uuc       aa 
         acgccgCUAUAGAACAUGAUCUUUAGCGG   uucuc      aaac   gcuaaag  c
         |||||||||||||||||||||||||||||   |||||      ||||   |||||||  a
         UGCGGCGAUAUCUUGUACUGGAAAucgcu   aagag      uuug   cgauuuc  u
aauacaccc                             gug     uauuuu    cga       ag 

Annotation confidence Low

Genome context

Unknown

Mature ghr-miR7492a-5p

• Accession: MIMAT0029134
• Description: Gossypium hirsutum ghr-miR7492a-5p mature miRNA
• Sequence: 11 - CUAUAGAACAUGAUCUUUAGCGG - 33
• Evidence: experimental ; Illumina [1]

Mature ghr-miR7492a-3p

• Accession: MIMAT0055321
• Description: Gossypium hirsutum ghr-miR7492a-3p mature miRNA
• Sequence: 99 - AAAGGUCAUGUUCUAUAGCGGCGU - 122
• Evidence: experimental ; unknown

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900