Stem-loop ghr-MIR7494

Accession

MI0024181

Description

Gossypium hirsutum ghr-MIR7494 precursor miRNA

Sequence

1691 reads, 123.0 reads per million, 50 experiments

uauucuccguuuguuaaaacuagucccuacacuuuuauuuuuuugaACAAUUUAAUUUUUUCGAGUGAGauaAGCUUGUGGACUAGUUUUAACAAaugaaaaaua
.......(((((((((((((((((((..(((..((((((((((((((.((......)).)))))).))))))))..)))))))))))))))))))))).......

Structure

uauucuc                   cu   cu        -      C  UU 
       cguuuguuaaaacuagucc  aca  uuuauuuu uuugaA AA  U
       |||||||||||||||||||  |||  |||||||| |||||| ||   
       guaAACAAUUUUGAUCAGG  UGU  GAauaGAG GAGCUU UU  A
auaaaaa                   --   UC        U      U  UA 

Annotation confidence Low

Genome context

Unknown

Mature ghr-miR7494-5p

• Accession: MIMAT0055326
• Description: Gossypium hirsutum ghr-miR7494-5p mature miRNA
• Sequence: 47 - ACAAUUUAAUUUUUUCGAGUGAG - 69
• Evidence: experimental ; unknown

Mature ghr-miR7494-3p

• Accession: MIMAT0029139
• Description: Gossypium hirsutum ghr-miR7494-3p mature miRNA
• Sequence: 73 - AGCUUGUGGACUAGUUUUAACAA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900