Stem-loop ghr-MIR7495a

Accession

MI0024182

Description

Gossypium hirsutum ghr-MIR7495a precursor miRNA

Literature search

4 open access papers mention ghr-MIR7495a
(4 sentences)

Sequence

80363 reads, 2736.0 reads per million, 51 experiments

uucaacagcuugAGGGAAACAUCUAAAGUAAACgacgaacgaacuuccauugauaaccgaugaacuuaguguuugaaggaagcaagaucauuucccgguuucauuuuucuuccgucggucagguaguucgccugguuuUUACUUUAGAUGUCUCCUUCAugcugucugu
....(((((.(((((((.((((((((((((((.(((.(.((((((.((..(((...(((((((((.....))).((((((((..(((((.......)))))...))))))))))))))))))).))))))..).))))))))))))))))).))))))).)))))....

Structure

uuca     u       A              C   g -a      u  au   uaa      aacuuaguguuu        -ca     au 
    acagc ugAGGGA ACAUCUAAAGUAAA gac a  cgaacu cc  uga   ccgaug            gaaggaag   agauc  u
    ||||| ||||||| |||||||||||||| ||| |  |||||| ||  |||   ||||||            ||||||||   |||||  u
    ugucg ACUUCCU UGUAGAUUUCAUUu uug u  gcuuga gg  acu   ggcugc            cuucuuuu   uuugg  c
uguc     u       C              -   g cc      u  --   ---      ------------        uac     cc 

Annotation confidence High

Genome context

Unknown

Mature ghr-miR7495a-5p

• Accession: MIMAT0055327
• Description: Gossypium hirsutum ghr-miR7495a-5p mature miRNA
• Sequence: 13 - AGGGAAACAUCUAAAGUAAAC - 33
• Evidence: experimental ; unknown

Mature ghr-miR7495a-3p

• Accession: MIMAT0029140
• Description: Gossypium hirsutum ghr-miR7495a-3p mature miRNA
• Sequence: 139 - UUACUUUAGAUGUCUCCUUCA - 159
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900