Stem-loop ghr-MIR7495b

Accession

MI0024183

Description

Gossypium hirsutum ghr-MIR7495b precursor miRNA

Literature search

3 open access papers mention ghr-MIR7495b
(3 sentences)

Sequence

80363 reads, 2736.0 reads per million, 51 experiments

uucaacagcuugAGGGAAACAUCUAAAGUAAACgacgaacgaacuuccauugauaaccgaugaacuuaguguuugaaggaagcaagaugucuccugguuuUUACUUUAGAUGUCUCCUUCAugcugucugu
....(((((.(((((((.((((((((((((((...((((((......(((((.....))))).......)))))).((((.(((...))).))))....)))))))))))))).))))))).)))))....

Structure

uuca     u       A              ---------------------Cga      -aacuuc     a 
    acagc ugAGGGA ACAUCUAAAGUAAA                        cgaacg       cauug u
    ||||| ||||||| ||||||||||||||                        ||||||       ||||| a
    ugucg ACUUCCU UGUAGAUUUCAUUu                        guuugu       guagc a
uguc     u       C              uugguccucuguagaacgaaggaa      gauucaa     c 

Annotation confidence High

Genome context

Unknown

Mature ghr-miR7495b-5p

• Accession: MIMAT0055328
• Description: Gossypium hirsutum ghr-miR7495b-5p mature miRNA
• Sequence: 13 - AGGGAAACAUCUAAAGUAAAC - 33
• Evidence: experimental ; unknown

Mature ghr-miR7495b-3p

• Accession: MIMAT0029141
• Description: Gossypium hirsutum ghr-miR7495b-3p mature miRNA
• Sequence: 101 - UUACUUUAGAUGUCUCCUUCA - 121
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900