Stem-loop ghr-MIR7502

Accession

MI0024191

Description

Gossypium hirsutum ghr-MIR7502 precursor miRNA

Literature search

3 open access papers mention ghr-MIR7502
(8 sentences)

Sequence

9922 reads, 486.0 reads per million, 51 experiments

uuguuaaaaaugucaucuauuuuuacuauuaaaaaguccuugcacaUUAGAAUAAGGUACAUGUAacuguuuaguuauucuauagcaaugucaaUUUUUAACAGUAGAAAUGAAUGAAuuuauuacua
..((...((((.((((.((((((((((.(((((((..(.((((....((((((((...(((......)))....))))))))..)))).)....))))))).)))))))))).))))))))...))..

Structure

uu  uaa    g    c          a       --gu c    acaU        -GGU   UG 
  gu   aaau ucau uauuuuuacu uuaaaaa    c uugc    UAGAAUAA    ACA  U
  ||   |||| |||| |||||||||| |||||||    | ||||    ||||||||    |||   
  ca   uuuA AGUA GUAAAGAUGA AAUUUUU    g aacg    aucuuauu    ugu  A
au  uua    -    A          C       aacu u    --au        gauu   ca 

Annotation confidence Low

Genome context

Unknown

Mature ghr-miR7502-5p

• Accession: MIMAT0055334
• Description: Gossypium hirsutum ghr-miR7502-5p mature miRNA
• Sequence: 47 - UUAGAAUAAGGUACAUGUA - 65
• Evidence: experimental ; unknown

Mature ghr-miR7502-3p

• Accession: MIMAT0029149
• Description: Gossypium hirsutum ghr-miR7502-3p mature miRNA
• Sequence: 95 - UUUUUAACAGUAGAAAUGAAUGAA - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900