Stem-loop ghr-MIR7503

Accession

MI0024192

Description

Gossypium hirsutum ghr-MIR7503 precursor miRNA

Literature search

1 open access papers mention ghr-MIR7503
(1 sentences)

Sequence

610 reads, 38.0 reads per million, 50 experiments

caguaauacuAGAUCGAUGGCUGAACAAGUUAGAucacuaguuuccgauucaaucaauucgaucgccagaccaacaauaauuaaagaaauaauuaaaaauucauaaAAUCUAAAAAAUCAAAUAaauaaaaaaauuuauuauaccgauucaaccuguucaacuaucgauuuugucaugauu
.......((.((((((((((.((((((.(((.((((....((((.(((((..........)))))..))))......((((((......)))))).........................(((((((......))))))).....)))).))).)))))).)))))))))).)).......

Structure

caguaau  u          C      A   A    acuaguuuccgauucaaucaauucgaucgccagaccaacaauaauuaaagaaauaauuaaaaauucauaaAAUCUAAAAAAUCA       aa 
       ac AGAUCGAUGG UGAACA GUU GAuc                                                                                    AAUAaau  a
       || |||||||||| |||||| ||| ||||                                                                                    |||||||   
       ug uuuagcuauc acuugu caa uuag                                                                                    uuauuua  a
uuaguac  u          a      c   c    -------------------------------------------------------------------------------ccaua       aa 

Annotation confidence Low

Genome context

Unknown

Mature ghr-miR7503-5p

• Accession: MIMAT0029150
• Description: Gossypium hirsutum ghr-miR7503-5p mature miRNA
• Sequence: 11 - AGAUCGAUGGCUGAACAAGUUAGA - 34
• Evidence: experimental ; Illumina [1]

Mature ghr-miR7503-3p

• Accession: MIMAT0055335
• Description: Gossypium hirsutum ghr-miR7503-3p mature miRNA
• Sequence: 107 - AAUCUAAAAAAUCAAAUA - 124
• Evidence: experimental ; unknown

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900