miRBase entry: ghr-MIR7513

Stem-loop ghr-MIR7513


Accession
MI0024204
Description
Gossypium hirsutum ghr-MIR7513 precursor miRNA


Sequence

48416 reads, 1071.0 reads per million, 42 experiments
gcaugaauaaccAAACUAUUCCUGGCUGAUUCGcaccaguuauucauuaguuuaguucauuguuuaucaccgAAUCAGCCAGGAAUCGUUUGAuuauucucau
....((((((.(((((.((((((((((((((((.......((..((..............))..))....)))))))))))))))).))))).))))))....

Structure
gcau      c     U                caccagu  uu  uuaguu 
    gaauaa cAAAC AUUCCUGGCUGAUUCG       ua  ca      u
    |||||| ||||| ||||||||||||||||       ||  ||       
    cuuauu GUUUG UAAGGACCGACUAAgc       au  gu      a
uacu      A     C                ---cacu  uu  uacuug 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ghr-miR7513-5p

Accession MIMAT0055342
Description Gossypium hirsutum ghr-miR7513-5p mature miRNA
Sequence 13 - AAACUAUUCCUGGCUGAUUCG - 33
Evidence experimental
unknown

Mature ghr-miR7513-3p

Accession MIMAT0029162
Description Gossypium hirsutum ghr-miR7513-3p mature miRNA
Sequence 73 - AAUCAGCCAGGAAUCGUUUGA - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138860
    A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
    "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
    "Mol Plant (2012) 5:889-900