Stem-loop mes-MIR167c

Accession

MI0024245

Description

Manihot esculenta mes-MIR167c precursor miRNA

Literature search

5 open access papers mention mes-MIR167c
(20 sentences)

Sequence

gggaaaaggUGAAGCUGCCAGCAUGAUCUAgcuuugguuagagggaaagagaaggguugauuuuacuaacccuaacuaggucaugcucugacagccucacucuuuccu
((((((.(((((.(((((.((((((((((((....((((((.((((..((......))..)))).))))))....))))))))))))..).)))).))))).))))))

Structure

      a     A    - -C            cuuu      a    aa  ga 
gggaaa ggUGA GCUG C  AGCAUGAUCUAg    gguuag ggga  ga  a
|||||| ||||| |||| |  ||||||||||||    |||||| ||||  ||   
uccuuu ucacu cgac g  ucguacuggauc    ccaauc uuuu  uu  g
      c     c    a uc            aauc      a    ag  gg 

Annotation confidence Not enough data

Genome context

scaffold11998: 669702-669809 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mes-MIR167c

Mature mes-miR167c

• Accession: MIMAT0029203
• Description: Manihot esculenta mes-miR167c mature miRNA
• Sequence: 10 - UGAAGCUGCCAGCAUGAUCUA - 30
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269