Stem-loop mes-MIR167e

Accession

MI0024247

Description

Manihot esculenta mes-MIR167e precursor miRNA

Literature search

5 open access papers mention mes-MIR167e
(20 sentences)

Sequence

ucguguaccacuaguaguUGAAGCUGCCAGCAUGAUCUGAgcuuuccuugacuaucuuauauugaauuaucgauccggaggagagacuagaucaugugguugcuucaccuauugcugguagcauga
((((((((((.((((((.((((((.((((.(((((((((..((((((((....(((..(((......))).)))...))))))))..))))))))))))).)))))).)))))).)))).))))))

Structure

      -    c      u      U    G         Ag        gacu   uu   uu 
ucgugu acca uaguag UGAAGC GCCA CAUGAUCUG  cuuuccuu    auc  aua  g
|||||| |||| |||||| |||||| |||| |||||||||  ||||||||    |||  |||   
aguacg uggu guuauc acuucg uggu guacuagau  gagaggag    uag  uau  a
      a    c      c      u    -         ca        -gcc   -c   ua 

Annotation confidence Not enough data

Genome context

scaffold03802: 653294-653419 [-]

Mature mes-miR167e

• Accession: MIMAT0029205
• Description: Manihot esculenta mes-miR167e mature miRNA
• Sequence: 19 - UGAAGCUGCCAGCAUGAUCUGA - 40
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269