miRBase entry: mes-MIR169g

Stem-loop mes-MIR169g


Accession
MI0024257
Description
Manihot esculenta mes-MIR169g precursor miRNA

Literature search
10 open access papers mention mes-MIR169g
(28 sentences)

Sequence

uaugCAGCCAAGGAUGACUUGCCGAccaguggccuauucaagaagaagcaaaagaccaaguuggcaaguuguccuuggcuacaug
((((.(((((((((((((((((((((...(((.((.(((........).)).)).))).))))))))))))))))))))).))))

Structure
    C                     cag   c  a  - aag 
uaug AGCCAAGGAUGACUUGCCGAc   ugg cu uu c   a
|||| |||||||||||||||||||||   ||| || || |    
guac ucgguuccuguugaacgguug   acc ga aa g   a
    a                     --a   a  a  c aag 


Annotation confidence Not enough data
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Genome context
scaffold06582: 708959-709043 [-]

Database links

Mature mes-miR169g

Accession MIMAT0029215
Description Manihot esculenta mes-miR169g mature miRNA
Sequence 5 - CAGCCAAGGAUGACUUGCCGA - 25
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269