Stem-loop mes-MIR169o

Accession

MI0024265

Description

Manihot esculenta mes-MIR169o precursor miRNA

Literature search

10 open access papers mention mes-MIR169o
(28 sentences)

Sequence

guuuggUAGCCAAGGAUGACUUGCCUGcagcuucacgcagauuuuucaucuuugcaugaaauaacgcggcuaacuaagguuuugaauauguaugugguuuacaggcauucuccuuggcuaacgagac
((((.(((((((((((.((..((((((.((((.((.(((.((((...((((((((..........))).......)))))...)))).))).)).))))..)))))).))))))))))).)).))))

Structure

    g  -         U  CU      -c    u  c   g    uuc     -------   auga 
guuu gU AGCCAAGGA GA  UGCCUG  agcu ca gca auuu   aucuu       ugc    a
|||| || ||||||||| ||  ||||||  |||| || ||| ||||   |||||       |||     
caga ca ucgguuccu cu  acggac  uugg gu ugu uaag   uggaa       gcg    a
    g  a         -  -u      au    u  a   a    uuu     ucaaucg   caau 

Annotation confidence Not enough data

Genome context

scaffold08757: 173499-173625 [-]

Mature mes-miR169o

• Accession: MIMAT0029223
• Description: Manihot esculenta mes-miR169o mature miRNA
• Sequence: 7 - UAGCCAAGGAUGACUUGCCUG - 27
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269