Stem-loop mes-MIR169r

Accession

MI0024268

Description

Manihot esculenta mes-MIR169r precursor miRNA

Literature search

10 open access papers mention mes-MIR169r
(28 sentences)

Sequence

gUAGCCAAGGAUGACUUGCCCGcuacacugagaaggcauugaucuuguuugcuguuagaacuuuuuuuuggcuuugggcaaucauccuugguuau
((((((((((((((.((((((((((....((((((...(((((..........)))))..))))))..))))...))))))))))))))))))))

Structure

              C      ---    cacu      gca     cuug 
gUAGCCAAGGAUGA UUGCCC   Gcua    gagaag   uugau    u
|||||||||||||| ||||||   ||||    ||||||   |||||     
uauugguuccuacu aacggg   cggu    uuuuuc   gauug    u
              -      uuu    --uu      -aa     ucgu 

Annotation confidence Not enough data

Genome context

scaffold05005: 6216-6310 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mes-MIR169r

Mature mes-miR169r

• Accession: MIMAT0029226
• Description: Manihot esculenta mes-miR169r mature miRNA
• Sequence: 2 - UAGCCAAGGAUGACUUGCCCG - 22
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269