Stem-loop mes-MIR169w

Accession

MI0024273

Description

Manihot esculenta mes-MIR169w precursor miRNA

Literature search

10 open access papers mention mes-MIR169w
(28 sentences)

Sequence

UAGCCAAGGAUGACUUGCCUGauuuccuagcauuuuggguuguggcuugcaacaaucuuuauacaaauguaacccuugaugcagguucucaggcagucuccuuggcuaa
((((((((((.((((.((((((...(((.(((((..((((((....(((..............)))...))))))..))))))))...)))))))))))))))))))).

Structure

-          U    U      uuu   a     uu      uggc   caacaa 
 UAGCCAAGGA GACU GCCUGa   ccu gcauu  ggguug    uug      u
 |||||||||| |||| ||||||   ||| |||||  ||||||    |||       
 aucgguuccu cuga cggacu   gga cguag  cccaau    aac      c
a          -    -      cuu   -     uu      -gua   auauuu 

Annotation confidence Not enough data

Genome context

scaffold05005: 23286-23394 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mes-MIR169w

Mature mes-miR169w

• Accession: MIMAT0029231
• Description: Manihot esculenta mes-miR169w mature miRNA
• Sequence: 1 - UAGCCAAGGAUGACUUGCCUG - 21
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269