Stem-loop mes-MIR169z

Accession

MI0024276

Description

Manihot esculenta mes-MIR169z precursor miRNA

Literature search

10 open access papers mention mes-MIR169z
(28 sentences)

Sequence

gUAGCCAAGGAUGACUUGCCCGcuacacugagaaggcuuugaucuuguuugcuguuagaacuuuuuuuuggcuuugggcaaucauccuugguuau
((((((((((((((.(((((((...((..(((((((.((((((..........)))))).))))))).))....)))))))))))))))))))))

Structure

              C       -cua  cu       c      cuug 
gUAGCCAAGGAUGA UUGCCCG    ca  gagaagg uuugau    u
|||||||||||||| |||||||    ||  ||||||| ||||||     
uauugguuccuacu aacgggu    gu  uuuuuuc agauug    u
              -       uucg  -u       a      ucgu 

Annotation confidence Not enough data

Genome context

scaffold05005: 23017-23111 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mes-MIR169z

Mature mes-miR169z

• Accession: MIMAT0029234
• Description: Manihot esculenta mes-miR169z mature miRNA
• Sequence: 2 - UAGCCAAGGAUGACUUGCCCG - 22
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269