Stem-loop mes-MIR171k

Accession

MI0024289

Description

Manihot esculenta mes-MIR171k precursor miRNA

Literature search

7 open access papers mention mes-MIR171k
(16 sentences)

Sequence

aagagagauguuggaauggcucaaucaaaucaaaucucucaaggguucuuggguccuuuaaucUGAUUGAGCCGUGCCAAUAUCccucuu
(((((.((((((((.((((((((((((.((.(((...((((((....))))))...))).)).)))))))))))).)))))))).)))))

Structure

     a        a            a  c   ucu      g 
aagag gauguugg auggcucaauca au aaa   cucaag g
||||| |||||||| |||||||||||| || |||   ||||||  
uucuc CUAUAACC UGCCGAGUUAGU ua uuu   ggguuc u
     c        G            c  a   ccu      u 

Annotation confidence Not enough data

Genome context

scaffold01701: 155454-155543 [+]

Mature mes-miR171k

• Accession: MIMAT0029247
• Description: Manihot esculenta mes-miR171k mature miRNA
• Sequence: 64 - UGAUUGAGCCGUGCCAAUAUC - 84
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269