Stem-loop mes-MIR172d

Accession

MI0024292

Description

Manihot esculenta mes-MIR172d precursor miRNA

Literature search

4 open access papers mention mes-MIR172d
(8 sentences)

Sequence

gcuggugcagcaucaucaagauucacaugcaaaugcauuucuuugucuuucucucucucuuucucucugucuaucuauuuuuucuugguuuugaaggaugagagugAGAAUCUUGAUGAUGCUGCAUcggc
((((((((((((((((((((((((..((((....))))...........((.(((((((((((.............................)))))).))))).))))))))))))))))))))))))))

Structure

                        acaugcaaaugcauuucuuugucuu  u     -      ucucugucuaucu 
gcuggugcagcaucaucaagauuc                         uc cucuc ucuuuc             a
||||||||||||||||||||||||                         || ||||| ||||||             u
cggcUACGUCGUAGUAGUUCUAAG                         Ag gagag aggaag             u
                        -------------------------  u     u      uuuugguucuuuu 

Annotation confidence Not enough data

Genome context

scaffold00224: 433803-433933 [+]

Mature mes-miR172d

• Accession: MIMAT0029250
• Description: Manihot esculenta mes-miR172d mature miRNA
• Sequence: 107 - AGAAUCUUGAUGAUGCUGCAU - 127
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269