Stem-loop mes-MIR319e

Accession

MI0024299

Description

Manihot esculenta mes-MIR319e precursor miRNA

Literature search

6 open access papers mention mes-MIR319e
(20 sentences)

Sequence

aaggagcucucuucuguccaguccaaggcaguugaagccugaaacuuagcugcugagucguugguucaagagcucaucauaugguaagcagugaaugagauguguuuuugauccaacgaagcaggagcuauguucugucauggcugucgugucUUGGACUGAAGGGAGCUCCCU
..((((((((((((.....(((((((((((.....((((((((((.(((((.(((..(((((((.((((((((.((((.(((............))).)))).)))))))).)))))))..))).))))).)))...))).))))....)))))))))))))))))))))))..

Structure

aa            ugucc           guuga    -   ---   u     g   ag       u        u    a   gguaa 
  ggagcucucuuc     aguccaaggca     agcc uga   aac uagcu cug  ucguugg ucaagagc cauc uau     g
  ||||||||||||     |||||||||||     |||| |||   ||| ||||| |||  ||||||| |||||||| |||| |||      
  CCUCGAGGGAAG     UCAGGUUcugu     ucgg acu   uug aucga gac  agcaacc aguuuuug guag gua     c
UC            -----           -gcug    u   guc   u     g   ga       u        u    a   aguga 

Annotation confidence Not enough data

Genome context

scaffold03264: 101781-101954 [-]

Mature mes-miR319e

• Accession: MIMAT0029257
• Description: Manihot esculenta mes-miR319e mature miRNA
• Sequence: 154 - UUGGACUGAAGGGAGCUCCCU - 174
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269