Stem-loop mes-MIR319g

Accession

MI0024301

Description

Manihot esculenta mes-MIR319g precursor miRNA

Literature search

6 open access papers mention mes-MIR319g
(20 sentences)

Sequence

gaauguggaaauggugugagagagcuuccuucagcccacucauggaugggguaaaaggggcggaaauaucugccgacucauucauucaagcacuaguagacagagauacugguaauacuguguuuagcuacugugauugcgugaaugaugcgggagauaauuuugcaucccucuuuucugugcUUGGACUGAAGGGAGCUCCUUccuucucuauuaccuacauuu
((((((((.(((((.(.(((.(((((((((((((.(((..((((((.(((.....((((((((((.(((((.(((..((((((((.(((.(((.(((((.(..((((((.(......).)))))).))))))))).))).))))))))..))).))))).))))))..))))))).))))))..))).))))))))))))).)))...).))))).)).))))))

Structure

      -  a     u --u   a             c   cu      u   guaaa    --      a     g   ac        u   g   u     a ag      u gu 
gaaugu gg aaugg g   gag gagcuuccuucag cca  caugga ggg     aggg  gcggaa uaucu ccg  ucauucau caa cac aguag c  agauac g  a
|||||| || ||||| |   ||| ||||||||||||| |||  |||||| |||     ||||  |||||| ||||| |||  |||||||| ||| ||| ||||| |  |||||| |   
uuuaca cc uuauc c   cUU CUCGAGGGAAGUC GGU  gugucu uuc     uccc  cguuuu auaga ggc  aguaagug guu gug ucauc g  uuugug c  a
      u  a     u uuc   C             A   Uc      u   -----    ua      a     g   gu        c   a   -     - -a      u au 

Annotation confidence Not enough data

Genome context

scaffold03454: 69872-70096 [-]

Mature mes-miR319g

• Accession: MIMAT0029259
• Description: Manihot esculenta mes-miR319g mature miRNA
• Sequence: 184 - UUGGACUGAAGGGAGCUCCUU - 204
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269