Stem-loop mes-MIR393d

Accession

MI0024307

Description

Manihot esculenta mes-MIR393d precursor miRNA

Literature search

4 open access papers mention mes-MIR393d
(18 sentences)

Sequence

ugauuaguuagugcaggcggaggguUCCAAAGGGAUCGCAUUGAUCUacugauuccuccauuaaaugaguuaaaauucucacuuuuuuauucauuggaucaugcgaucccuuaggaauucuccaccuauagcucuaaauuca
(((....((((.(((((.((((((((((.((((((((((((.((((((.(((..........((.((((........)))).))......))).)))))))))))))))))).)))))))))).)))...)).))))..)))

Structure

   uuag    u  ---   c          A            U      c   uuccuccauu  a    uua 
uga    uuag gc   agg ggaggguUCC AAGGGAUCGCAU GAUCUa uga          aa ugag   a
|||    |||| ||   ||| |||||||||| |||||||||||| |||||| |||          || ||||    
acu    aauc cg   ucc ccucuuaagg uucccuagcgua cuaggu acu          uu acuc   a
   --ua    u  aua   a          a            -      u   ----uauuuu  c    uua 

Annotation confidence Not enough data

Genome context

scaffold00341: 615432-615573 [+]

Mature mes-miR393d

• Accession: MIMAT0029265
• Description: Manihot esculenta mes-miR393d mature miRNA
• Sequence: 26 - UCCAAAGGGAUCGCAUUGAUCU - 47
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269