Stem-loop mes-MIR394b

Accession

MI0024308

Description

Manihot esculenta mes-MIR394b precursor miRNA

Literature search

3 open access papers mention mes-MIR394b
(15 sentences)

Sequence

ucauguggguuuaacaaaggguuucuuacagaguuuaUUGGCAUUCUGUCCACCUCCcaucuauggaaaucuucucuuuuucuuuuguggaggugggcauacugucaagugagcucuguuggucucucuuuguaaaacccucauga
(((((.((((((.((((((((...((.((((((((((((((((...(((((((((((((.....(((((........)))))...)).)))))))))))...)))).)))))))))))).))...)))))))).)))))).)))))

Structure

     u      a        uuu  u            -    UUC           -  ucuau     ucu 
ucaug ggguuu acaaaggg   cu acagaguuuaUU GGCA   UGUCCACCUCC ca     ggaaa   u
||||| |||||| ||||||||   || |||||||||||| ||||   ||||||||||| ||     |||||    
aguac cccaaa uguuucuc   gg ugucucgaguga cugu   acggguggagg gu     cuuuu   c
     u      a        ucu  u            a    cau           u  --uuu     ucu 

Annotation confidence Not enough data

Genome context

scaffold02943: 554374-554519 [+]

Mature mes-miR394b

• Accession: MIMAT0029266
• Description: Manihot esculenta mes-miR394b mature miRNA
• Sequence: 38 - UUGGCAUUCUGUCCACCUCC - 57
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269