Stem-loop mes-MIR395e

Accession

MI0024314

Description

Manihot esculenta mes-MIR395e precursor miRNA

Literature search

6 open access papers mention mes-MIR395e
(11 sentences)

Sequence

guuuggggucaccuugaguuccuccuacugcuucaguacugaagcuguucgaucgucuuagcaauggcaugaaauuggcagcuuaauuaguugggaaaaugaaauggcgauuugCUGAAGGGUUUGGAGGAACUCugggugcucccaaacu
((((((((.(((((.((((((((((.(((.((((((((.....((((((..((..(((((((((((((.((.......)))))..))).)))))))..))..))))))....)))))))))))..)))))))))).))))).)))))))).

Structure

-        u     u          -u   g        cugaa      cg  cg       -   --   a  aa 
 guuugggg caccu gaguuccucc  acu cuucagua     gcuguu  au  ucuuagc aau  ggc ug  a
 |||||||| ||||| ||||||||||  ||| ||||||||     ||||||  ||  ||||||| |||  ||| ||  u
 caaacccu guggg CUCAAGGAGG  UGG GAAGUCgu     cgguaa  ua  aggguug uua  ucg ac  u
u        c     u          UU   -        -uuag      ag  aa       a   au   -  gg 

Annotation confidence Not enough data

Genome context

scaffold00080: 382438-382588 [-]

Mature mes-miR395e

• Accession: MIMAT0029272
• Description: Manihot esculenta mes-miR395e mature miRNA
• Sequence: 115 - CUGAAGGGUUUGGAGGAACUC - 135
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269