Stem-loop mes-MIR396c

Accession

MI0024317

Description

Manihot esculenta mes-MIR396c precursor miRNA

Literature search

3 open access papers mention mes-MIR396c
(15 sentences)

Sequence

ugucaugcuuUUCCACAGCUUUCUUGAACUUcuucuucuucaucuucugcuugauuuuggcuuagaaguucaagaaagcugugggagaacauggca
(((((((.(((((((((((((((((((((((((...((...(((........)))...))...))))))))))))))))))))))))).)))))))

Structure

       c                         ucu  uuc   uuc 
ugucaug uuUUCCACAGCUUUCUUGAACUUcu   uc   auc   u
||||||| |||||||||||||||||||||||||   ||   |||    
acgguac agagggugucgaaagaacuugaaga   gg   uag   g
       a                         uuc  uuu   uuc 

Annotation confidence Not enough data

Genome context

scaffold12498: 129874-129969 [-]

Mature mes-miR396c

• Accession: MIMAT0029275
• Description: Manihot esculenta mes-miR396c mature miRNA
• Sequence: 11 - UUCCACAGCUUUCUUGAACUU - 31
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269