Stem-loop mes-MIR1446

Accession

MI0024347

Description

Manihot esculenta mes-MIR1446 precursor miRNA

Literature search

1 open access papers mention mes-MIR1446
(1 sentences)

Sequence

uagagacucagcuuuUUCUGAACUCUCUCCCUCAUaggcuucucaaaacuugccuaucaaaccuccacauaaauuggcaagauugagaagaagccuauggugagaaaguucaaaaaaaguuugguucucug
((((((((.((((((((.((((((.((((.(.((((((((((((((..((((((.....................)))))).))))))...))))))))).)))).)))))).)))))))).)).))))))

Structure

      -  c        C      C    C U        ---      aa      uaucaaacc 
uagaga cu agcuuuUU UGAACU UCUC C CAUaggcu   ucucaa  cuugcc         u
|||||| || |||||||| |||||| |||| | ||||||||   ||||||  ||||||         c
gucucu gg uugaaaaa acuuga agag g guauccga   agaguu  gaacgg         c
      u  u        a      a    u -        aga      -a      uuaaauaca 

Annotation confidence Not enough data

Genome context

scaffold12262: 17213-17343 [+]

Mature mes-miR1446

• Accession: MIMAT0029305
• Description: Manihot esculenta mes-miR1446 mature miRNA
• Sequence: 16 - UUCUGAACUCUCUCCCUCAU - 35
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269