Stem-loop aja-mir-1893

Accession

MI0024355

Description

Artibeus jamaicensis aja-mir-1893 precursor miRNA

Sequence

ccagagcggagagguaucugcugcgccugagaugaguaaacugucguuucgGGCGCGGGCGCUAGACGCCUCGaagccgcugc
....(((((.(((((.(((((((((((((((((((........)))))))))))))))....)))).)))))....)))))..

Structure

ccag     ---a     a    ----               gua 
    agcgg    gaggu ucug    cugcgccugagauga   a
    |||||    ||||| ||||    |||||||||||||||    
    ucgcc    CUCCG AGAU    GGCGCGGgcuuugcu   a
--cg     gaaG     C    CGCG               guc 

Annotation confidence Not enough data

Genome context

Unknown

Mature aja-miR-1893

• Accession: MIMAT0031133
• Description: Artibeus jamaicensis aja-miR-1893 mature miRNA
• Sequence: 52 - GGCGCGGGCGCUAGACGCCUCG - 73
• Evidence: not_experimental

References

1. PubMed ID: 23166587
   Transcriptome sequencing and annotation for the Jamaican fruit bat (Artibeus jamaicensis)
   "Shaw TI, Srivastava A, Chou WC, Liu L, Hawkinson A, Glenn TC, Adams R, Schountz T"
   "PLoS One (2012) 7:e48472