miRBase entry: aja-mir-145

Stem-loop aja-mir-145


Accession
MI0024360
Description
Artibeus jamaicensis aja-mir-145 precursor miRNA


Sequence

caccuuguccucacgguccaguuuucccaggaaucccuuagaugcuaagauggGGAUUCCUGGAAAUACUGUUCUugaggucaugguu
.(((.((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).))))..))))))).)).))).

Structure
c   u  u     c  uc    u  c            uagau 
 acc ug ccuca gg  cagu uu ccaggaaucccu     g
 ||| || ||||| ||  |||| || ||||||||||||     c
 ugg ac ggagu UC  GUCA AA GGUCCUUAGGgg     u
u   u  u     -  UU    U  A            uagaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aja-miR-145

Accession MIMAT0031138
Description Artibeus jamaicensis aja-miR-145 mature miRNA
Sequence 54 - GGAUUCCUGGAAAUACUGUUCU - 75
Evidence not_experimental

References

  1. PubMed ID: 23166587
    Transcriptome sequencing and annotation for the Jamaican fruit bat (Artibeus jamaicensis)
    "Shaw TI, Srivastava A, Chou WC, Liu L, Hawkinson A, Glenn TC, Adams R, Schountz T"
    "PLoS One (2012) 7:e48472