Accession
MI0024376
Description
Lotus japonicus
lja-MIR167c precursor miRNA
Sequence
366018
reads,
17221.0
reads per million, 9 experiments
ggucacaauggaaauagUGAAGCUGCCAGCAUGAUCUagcuuugguuagugagaggagcaacagaucaaugcuaacccucacuagGUCAUGCUGUGCUAGCCUCACUccuuccuauuuggagacc
((((.(((.((((..(((((.((((((((((((((((((....((((((((....((........))..))))))))....))))))))))))).)).))).)))))..))))...)))..))))
((((.(((.((((..(((((.((((((((((((((((((....((((((((....((........))..))))))))....))))))))))))).)).))).)))))..))))...)))..))))
Structure
-a --u au A - - cuuu agag gca
gguc caa ggaa agUGA GCU GC CAGCAUGAUCUag gguuagug ga a
|||| ||| |||| ||||| ||| || ||||||||||||| |||||||| ||
ccag guu ccuu UCACU CGA CG GUCGUACUGgauc ccaaucgu cu c
ag uau cc C U U acuc --aa aga
Annotation confidence
High
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Genome context
Chr5: 18177341-18177465 [+]
Database links
Mature lja-miR167c-5p
| Accession | MIMAT0029313 |
| Description | Lotus japonicus lja-miR167c-5p mature miRNA |
| Sequence | 18 - UGAAGCUGCCAGCAUGAUCU - 37 |
| Evidence |
experimental
cloned [1], Northern [1] |
Mature lja-miR167c-3p
| Accession | MIMAT0054571 |
| Description | Lotus japonicus lja-miR167c-3p mature miRNA |
| Sequence | 86 - GUCAUGCUGUGCUAGCCUCACU - 107 |
| Evidence |
experimental
unknown |
References
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