Stem-loop lja-MIR7517

Accession

MI0024391

Description

Lotus japonicus lja-MIR7517 precursor miRNA

Sequence

uuauaggcuuaaauaaguuuuuggucccuaaccuuuaccauauguuugguuuucaucccucgccacccaccuuuacuccggcgagggacuaaaaccaaacAUAUGGUAAAGGUUAGGGACCaaaaacuuauagcagcauuuga
......(((...(((((((((((((((((((((((((((((((((((((((((..(((((((((...............)))))))))..)))))))))))))))))))))))))))))))))))))))))...)))......

Structure

uuauag   uaa                                         ca         acccac 
      gcu   auaaguuuuuggucccuaaccuuuaccauauguuugguuuu  ucccucgcc      c
      |||   |||||||||||||||||||||||||||||||||||||||||  |||||||||      u
      cga   uauucaaaaaCCAGGGAUUGGAAAUGGUAUAcaaaccaaaa  agggagcgg      u
aguuua   cga                                         uc         ccucau 

Annotation confidence Not enough data

Genome context

Chr3: 40233447-40233589 [-]

Mature lja-miR7517

• Accession: MIMAT0029332
• Description: Lotus japonicus lja-miR7517 mature miRNA
• Sequence: 101 - AUAUGGUAAAGGUUAGGGACC - 121
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154