Stem-loop lja-MIR7522

Accession

MI0024396

Description

Lotus japonicus lja-MIR7522 precursor miRNA

Sequence

uaAACUGCGGACAGGUUUUAUGACuaccgcauguuuaagugcggcagauggucaauuuuuuuuaauucucucugaauucucucugaauguuuauaaauucuuuguucuguccgcacuuuaauaugcggcagcacauauuugccuuucacaguuua
(((((((.(((.((((..((((.((.(((((((((.((((((((((((...............(((((.....)))))......((((........)))).....)))).)))))))).))))))))).))..))))...))))))).)))))))

Structure

       C   C    -UU    -A  a         u        -    ------------uggucaauuuuuuuu     u 
uaAACUG GGA AGGU   UAUG  Cu ccgcauguu aagugcgg caga                           aauuc c
||||||| ||| ||||   ||||  || ||||||||| |||||||| ||||                           ||||| u
auuugac cuu uccg   auac  ga ggcguauaa uucacgcc gucu                           uuaag c
       a   -    uuu    ac  c         u        u    uguuucuuaaauauuuguaagucucuc     u 

Annotation confidence Not enough data

Genome context

Chr1: 7960657-7960811 [+]

Mature lja-miR7522

• Accession: MIMAT0029337
• Description: Lotus japonicus lja-miR7522 mature miRNA
• Sequence: 3 - AACUGCGGACAGGUUUUAUGAC - 24
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154