Stem-loop lja-MIR7529

Accession

MI0024411

Description

Lotus japonicus lja-MIR7529 precursor miRNA

Sequence

gccggaaaauuuucuuuuggaggccagcucucucggacaaguucaguuacuggugauguuaaCCGUAGCAUCAAUUUAUCCGAguauguuuucccccucaugaacacaauuccagc
((.((((....(((....((.((..(((...((((((.(((((..(((((.(((.......))))))))...))))).))))))...)))..)).))....))).....)))).))

Structure

  c    -aauu   uuuu  a  cc   ucu      c     -ca     u   ga 
gc ggaa     uuc    gg gg  agc   cucgga aaguu   guuac ggu  u
|| ||||     |||    || ||  |||   |||||| |||||   ||||| |||  g
cg ccuu     aag    cc cc  uug   gAGCCU UUUAA   CGAUG CCa  u
  a    aacac   uacu  c  uu   uau      A     CUA     -   au 

Annotation confidence Not enough data

Genome context

Chr5: 23621735-23621850 [+]

Mature lja-miR7529

• Accession: MIMAT0029352
• Description: Lotus japonicus lja-miR7529 mature miRNA
• Sequence: 63 - CCGUAGCAUCAAUUUAUCCGA - 83
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154