Accession
MI0024414
Description
Lotus japonicus
lja-MIR7532a precursor miRNA
Sequence
1235
reads,
141.0
reads per million, 7 experiments
cgggucgcauugguucugGAAGCUGCCUCUGGUCGUGGUuggcucgguggucggcgcgcuacuucucgaccgagaaguucggagcaucuaccgaugcguguuccCGGCACCGGAGGCUCAGCCACaggugcaugcggcaccg
((((((((((....((((...(((((((((((((..((...(((((((((...((.(...(((((((....)))))))...).))..))))))).)).....))..).)))))))))..)))..))))...))))))).)))
((((((((((....((((...(((((((((((((..((...(((((((((...((.(...(((((((....)))))))...).))..))))))).)).....))..).)))))))))..)))..))))...))))))).)))
Structure
- uggu GAA -- - GU --Uug - ucg g gcu g cgg gucgcau ucug GCU GCCUCUGGU C GG gc ucggugg gc c acuucuc a ||| ||||||| |||| ||| ||||||||| | || || ||||||| || | ||||||| gcc cggcgua ggaC CGA CGGAGGCCA G cc cg agccauc cg g ugaagag c a -cgu -AC CU C GC uugug u -ua a gcu c
Annotation confidence
Medium
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Genome context
Chr1: 1350080-1350221 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lja-MIR7532a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lja-miR7532a-5p
| Accession | MIMAT0029355 |
| Description | Lotus japonicus lja-miR7532a-5p mature miRNA |
| Sequence | 19 - GAAGCUGCCUCUGGUCGUGGU - 39 |
| Evidence |
experimental
cloned [1] |
Mature lja-miR7532a-3p
| Accession | MIMAT0054599 |
| Description | Lotus japonicus lja-miR7532a-3p mature miRNA |
| Sequence | 105 - CGGCACCGGAGGCUCAGCCAC - 125 |
| Evidence |
experimental
unknown |
References
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