Accession
MI0024425
Description
Lotus japonicus
lja-MIR7540a precursor miRNA
Sequence
2848
reads,
388.0
reads per million, 9 experiments
gaagaaggaagagagaaaugaaUGAUAUGAUAAGUGAUGUGAcagaaauugcagggagagauaagaagaagauaaaguggaaaugagauggaagagaaauagaagugugaaugaauuauuacuaaauuuauucauacuuuaaacuuuuucgaguucauuuccacuuuaauuucauuucuaccuaucuccuuauuuccuauuauaucauaUAUCACAUCUCAUACUUUaucucucucuucuuauuuc
((((.(((((((((((.((((((((..(((((.(((((((((..(((((...(((((((....((((((((.(((((((((((((((.((((((((.....((((((((((((((((.......))))))))))))))))...))))))))..))))))))))))))).))))..)))).....))))))))))))...))))))))).)))))....))))...)))).))))))))))).))))
((((.(((((((((((.((((((((..(((((.(((((((((..(((((...(((((((....((((((((.(((((((((((((((.((((((((.....((((((((((((((((.......))))))))))))))))...))))))))..))))))))))))))).))))..)))).....))))))))))))...))))))))).)))))....))))...)))).))))))))))).))))
Structure
a a --- --UA A -ca ugc -gaua -- a -a aaaua au
gaag aggaagagaga auga aUGA UGAUA GUGAUGUGA gaaau agggaga agaa gaag uaaaguggaaaugag uggaagag gaagugugaaugaauu u
|||| ||||||||||| |||| |||| ||||| ||||||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||||| |||||||||||||||| a
cuuu uucuucucucu uaUU UACU ACUAU uacuauauu cuuua uuccucu ucuu cuuu auuucaccuuuacuu gcuuuuuc uuucauacuuauuuaa c
a c UCA CUAC a auc --- aucca ua a ga --aaa au
Annotation confidence
Low
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Genome context
Chr4: 19595902-19596147 [-]
Database links
Mature lja-miR7540a-5p
| Accession | MIMAT0029366 |
| Description | Lotus japonicus lja-miR7540a-5p mature miRNA |
| Sequence | 23 - UGAUAUGAUAAGUGAUGUGA - 42 |
| Evidence |
experimental
cloned [1] |
Mature lja-miR7540a-3p
| Accession | MIMAT0054604 |
| Description | Lotus japonicus lja-miR7540a-3p mature miRNA |
| Sequence | 210 - UAUCACAUCUCAUACUUU - 227 |
| Evidence |
experimental
unknown |
References
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