Stem-loop lja-MIR7543

Accession

MI0024429

Description

Lotus japonicus lja-MIR7543 precursor miRNA

Sequence

gauuucuuugggguuUUAAUGAUACAUGUUUGACUcccuuaaacaaggucucaucgagucuuguguaugguaaaaacaccugcuugggguu
((((((...((((((((.((.(((((((...(((((((((....)))).......))))).))))))).)).))))).)))....))))))

Structure

      -uuu   -     A  G       UUU     -------    a 
gauuuc    ggg guuUU AU AUACAUG   GACUc       ccuu a
||||||    ||| ||||| || |||||||   |||||       ||||  
uugggg    ucc caaaa ug uaugugu   cugag       ggaa a
      uucg   a     a  g       --u     cuacucu    c 

Annotation confidence Not enough data

Genome context

Chr6: 21817956-21818046 [+]

Mature lja-miR7543

• Accession: MIMAT0029370
• Description: Lotus japonicus lja-miR7543 mature miRNA
• Sequence: 16 - UUAAUGAUACAUGUUUGACU - 35
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154