Stem-loop lja-MIR7545

Accession

MI0024431

Description

Lotus japonicus lja-MIR7545 precursor miRNA

Sequence

ugugugaUUGGGAAAGCUAGAGUGCUacugauaggaggagaaaaguaauguaucagaaacaaugugauuuguacauauuauuguucacauucuagcuuucuuaacaugaacauucuuauaca
((((((.(((((((((((((((((...((((((.................))))))..((((......))))(((......)))...))))))))))))))))))))..)))..........

Structure

----------   --   a                 ----------------------------CUa      ggaggag 
          ugu  gug UUGGGAAAGCUAGAGUG                               cugaua       a
          |||  ||| |||||||||||||||||                               ||||||       a
          aca  uac aauucuuucgaucuuac                               gacuau       a
acauauucuu   ag   -                 acuuguuauuauacauguuuaguguaacaaa      guaauga 

Annotation confidence Not enough data

Genome context

Chr6: 14924184-14924305 [+]

Mature lja-miR7545

• Accession: MIMAT0029372
• Description: Lotus japonicus lja-miR7545 mature miRNA
• Sequence: 8 - UUGGGAAAGCUAGAGUGCU - 26
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154