Stem-loop ipu-let-7a-5

Accession

MI0024436

Description

Ictalurus punctatus ipu-let-7a-5 precursor miRNA

Literature search

1 open access papers mention ipu-let-7a-5
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUuggugggagggaucaaacccuguucagcugauaacuauacagucuauugccuuccu
.(((((((((((((((((((((.(.((((((((......)))).)))).)....)))))))))))))))))))))...

Structure

--U                     ---u g    -    au 
   GAGGUAGUAGGUUGUAUAGUU    g uggg aggg  c
   |||||||||||||||||||||    | |||| ||||   
   uuccguuaucugacauaucaa    c acuu uccc  a
ucc                     uagu g    g    aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-let-7a

• Accession: MIMAT0029374
• Description: Ictalurus punctatus ipu-let-7a mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174