Stem-loop ipu-let-7a-6

Accession

MI0024437

Description

Ictalurus punctatus ipu-let-7a-6 precursor miRNA

Literature search

1 open access papers mention ipu-let-7a-6
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUugugggaaggaucacauccuauucaggugauaacuauacagucuauugccuucc
.((((((((((((((((((((((.((((.(((((...))))).)))).)....)))))))))))))))))))))..

Structure

-U                     ---- g    a     c 
  GAGGUAGUAGGUUGUAUAGUU    u uggg aggau  
  |||||||||||||||||||||    | |||| ||||| a
  uuccguuaucugacauaucaa    g acuu uccua  
cc                     uagu g    a     c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-let-7a

• Accession: MIMAT0029374
• Description: Ictalurus punctatus ipu-let-7a mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174