Stem-loop ipu-let-7e-1

Accession

MI0024447

Description

Ictalurus punctatus ipu-let-7e-1 precursor miRNA

Literature search

1 open access papers mention ipu-let-7e-1
(5 sentences)

Sequence

UGAGGUAGUAGAUUGAAUAGUUguggagcccugcgcucucucucugagauaacuauacaaucuacugucuuuc
.((((((((((((((.(((((((((((((.....)))))(((...))))))))))).))))))))))))))..

Structure

-U              A        ---------     c 
  GAGGUAGUAGAUUG AUAGUUgu         ggagc c
  |||||||||||||| ||||||||         ||||| u
  uucugucaucuaac uaucaaua         ucucg g
cu              a        gagucucuc     c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-let-7e

• Accession: MIMAT0029378
• Description: Ictalurus punctatus ipu-let-7e mature miRNA
• Sequence: 1 - UGAGGUAGUAGAUUGAAUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174