Stem-loop ipu-mir-100-1

Accession

MI0024456

Description

Ictalurus punctatus ipu-mir-100-1 precursor miRNA

Sequence

AACCCGUAGAUCCGAACUUGUGgugacuguccacacaagcuuguaucuauagguauc
.(((.((((((.(((.((((((.((......)))))))).))).)))))).)))...

Structure

--A   C      C   A      g  ac 
   ACC GUAGAU CGA CUUGUG ug  u
   ||| |||||| ||| |||||| ||   
   ugg uaucua guu gaacac ac  g
cua   a      u   c      -  cu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-100

• Accession: MIMAT0029385
• Description: Ictalurus punctatus ipu-miR-100 mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAACUUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174