Stem-loop ipu-mir-140

Accession

MI0024505

Description

Ictalurus punctatus ipu-mir-140 precursor miRNA

Sequence

cagugguuuuacccuaugguagguuacgucaugcuguucuACCACAGGGUAGAACCACGGAC
..(((((((((((((.(((((((.((.((...)))).))))))).)))))))))))))....

Structure

--ca             a       u  c  c 
    gugguuuuacccu ugguagg ua gu  
    ||||||||||||| ||||||| || || a
    CACCAAGAUGGGA ACCAucu gu cg  
CAGG             C       u  -  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-140

• Accession: MIMAT0029417
• Description: Ictalurus punctatus ipu-miR-140 mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174