miRBase entry: ipu-mir-182

Stem-loop ipu-mir-182


Accession
MI0024534
Description
Ictalurus punctatus ipu-mir-182 precursor miRNA


Sequence

UUUGGCAAUGGUAGAACUCACAcuggugagguagucagauccggugguucuagacuugccaacua
.(((((((...((((((...(((((((((.....)))...))))))))))))...)))))))...

Structure
--U       UGG      UCA      ---   g 
   UUGGCAA   UAGAAC   CAcugg   uga g
   |||||||   ||||||   ||||||   ||| u
   aaccguu   aucuug   guggcc   acu a
auc       cag      ---      uag   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-182

Accession MIMAT0029439
Description Ictalurus punctatus ipu-miR-182 mature miRNA
Sequence 1 - UUUGGCAAUGGUAGAACUCACA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174