Stem-loop ipu-mir-196d-1

Accession

MI0024545

Description

Ictalurus punctatus ipu-mir-196d-1 precursor miRNA

Sequence

UAGGUAGUUUUAUGUUGUUGGGCucuauuuuauauccccgcaacacgaaacugucuuaa
(((((((((((.((((((.(((.............))).)))))).))))))).)))).

Structure

-    -       A      U   Cucua 
 UAGG UAGUUUU UGUUGU GGG     u
 |||| ||||||| |||||| |||     u
 auuc gucaaag acaacg ccc     u
a    u       c      c   uauau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-196d

• Accession: MIMAT0029449
• Description: Ictalurus punctatus ipu-miR-196d mature miRNA
• Sequence: 1 - UAGGUAGUUUUAUGUUGUUGGGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174