Stem-loop ipu-mir-200a

Accession

MI0024554

Description

Ictalurus punctatus ipu-mir-200a precursor miRNA

Sequence

caucuuaccggacagugcuggacuguauaacuguuuucUAACACUGUCUGGUAACGAUG
(((((((((((((((((.((((..............)))).))))))))))))).))))

Structure

    -             c    cuguau 
cauc uuaccggacagug ugga      a
|||| ||||||||||||| ||||       
GUAG AAUGGUCUGUCAC AUcu      a
    C             A    uuuguc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-200a

• Accession: MIMAT0029453
• Description: Ictalurus punctatus ipu-miR-200a mature miRNA
• Sequence: 39 - UAACACUGUCUGGUAACGAUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174