Stem-loop ipu-mir-23a-1

Accession

MI0024593

Description

Ictalurus punctatus ipu-mir-23a-1 precursor miRNA

Sequence

ggguuccuggcaccgugauuugguggauaaacagaaaugaaaAUCACAUUGCCAGGGAUUUCC
.(((((((((((..(((((((..((......)).......)))))))..)))))))))))...

Structure

--g           cc       -----gg  ga 
   gguuccuggca  gugauuu       ug  u
   |||||||||||  |||||||       ||   
   UUAGGGACCGU  CACUAaa       ac  a
CCU           UA       aguaaag  aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-23a

• Accession: MIMAT0029481
• Description: Ictalurus punctatus ipu-miR-23a mature miRNA
• Sequence: 43 - AUCACAUUGCCAGGGAUUUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174