Stem-loop ipu-mir-27a

Accession

MI0024604

Description

Ictalurus punctatus ipu-mir-27a precursor miRNA

Sequence

caggacuuagcucacucugugaacagaucucggauauccuaugUUCACAGUGGCUAAGUUCCGCU
..(((((((((.((((..(((((((......((....))..))))))))))))))))))))....

Structure

--ca         u    cu       gaucuc  a 
    ggacuuagc cacu  gugaaca      gg u
    ||||||||| ||||  |||||||      ||  
    CUUGAAUCG GUGA  CACUUgu      cc a
UCGC         -    --       ----au  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-27a

• Accession: MIMAT0029487
• Description: Ictalurus punctatus ipu-miR-27a mature miRNA
• Sequence: 44 - UUCACAGUGGCUAAGUUCCGCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174