Stem-loop ipu-mir-338-3

Accession

MI0024619

Description

Ictalurus punctatus ipu-mir-338-3 precursor miRNA

Sequence

aacaauauccuggugcugccugaguacaucucacagacUCCAGCAUCAGUGAUUUUGUUG
(((((.((((((((((((...((((.(........)))))))))))))).))).))))).

Structure

-     u   -         ccu    a auc 
 aacaa auc cuggugcug   gagu c   u
 ||||| ||| |||||||||   |||| |    
 UUGUU UAG GACUACGAC   CUca g   c
G     U   U         ---    - aca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-338

• Accession: MIMAT0029502
• Description: Ictalurus punctatus ipu-miR-338 mature miRNA
• Sequence: 39 - UCCAGCAUCAGUGAUUUUGUUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174