Stem-loop ipu-mir-34c

Accession

MI0024624

Description

Ictalurus punctatus ipu-mir-34c precursor miRNA

Sequence

aggcagugcaguuaguugauuacaauccauaaaguAAUCACUAACCUCACUACCAGG
.((.((((..((((((.((((((..........))))))))))))..)))).))...

Structure

--a  c    ca      u      aauc 
   gg agug  guuagu gauuac    c
   || ||||  |||||| ||||||     
   CC UCAC  CAAUCA CUAAug    a
GGA  A    UC      -      aaau 

Annotation confidence Low

Genome context

Unknown

Mature ipu-miR-34c

• Accession: MIMAT0029505
• Description: Ictalurus punctatus ipu-miR-34c mature miRNA
• Sequence: 36 - AAUCACUAACCUCACUACCAGG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174