Stem-loop ipu-mir-460

Accession

MI0024639

Description

Ictalurus punctatus ipu-mir-460 precursor miRNA

Sequence

ccugcauuguacacacugugcggaaaacauggacaugCACAGCGCAUACAAUGUGGAUGC
.((((((((((..(.(((((((.............))))))).)..))))))))))....

Structure

---c          ca a       gaaaa 
    cugcauugua  c cugugcg     c
    ||||||||||  | |||||||     a
    GGUGUAACAU  G GACACgu     u
CGUA          AC C       acagg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-460

• Accession: MIMAT0029518
• Description: Ictalurus punctatus ipu-miR-460 mature miRNA
• Sequence: 38 - CACAGCGCAUACAAUGUGGAUGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174